11 10 2006 bioinformatics Tweet
プロテオミクス関係のモジュールがCPANに登場しました。
- Mass list file format conversions.
- Protein modifications.
- Protein sequences digestion with a large choice of possible enzyme types.
- Peptide mass computations with fixed and variable modifications. Match with experimental PMF data.
- Fragment mass computations for modified peptides and with neutral losses. Match with experimental MS/MS data. Possibility to define new types of fragments.
- Text/graphical output in many formats of MS/MS spectra and match with experimental data.
- Peptide HPLC elution time prediction.
- Protein pI estimation.
pIは別にEMBOSSでも予測できるんだけどHPLC周りとかMS/MSなんかちょっと気になりますな。あとphenyxともなにが違うのかも気になるヨ